Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTDYNINLTDSALKKIHSLVEQEEDKSSILRVAVSGGGCSGFKYNFLMDQIDKNLSLSDDDDDDEFDDEDDDDDESEDYRSRSSFSRKSKDIVINDKDGNPVLMVDNCSVKFLNNSIIDYTENLSGSGFQVKNALAKSQCGCGNSFSV
2APN Chain:A ((5-114))
--MAVPLTFTDAAANKVKSLISEEENTDLKLRVYITGGGCSGFQYGFTFDEKVNDG-----------------------------------DLTI--EKSGVQLVIDPMSLQYLIGGTVDYTEGLEGSRFTVNNPNATSTCGCGSSFSI
General information:
TITO was launched using:
RESULT:
Template:
2APN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30485 for 793 contacts (-38.4/contact) +
2D Compatibility (PS) -11894 + (NN) -5029 + (LL) 112
1D Compatibility (HY) -9200 + (ID) 2300
Total energy: -58796.0 ( -74.14 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_2APN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2APN-query.scw
PDB file :
Tito_Scwrl_2APN.pdb
: