Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAACRGYCRKIYLAID-NVLYAI-N--ETMVMWKKELKSLVK-----GN------PTIFND------KLAISTLDDCLYMLDMRMIVQSGPIISPVIMIVTK
1W6S Chain:A ((56-140))
-GAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGST
General information:
TITO was launched using:
RESULT:
Template:
1W6S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34837 for 338 contacts (-103.1/contact) +
2D Compatibility (PS) -6605 + (NN) 5122 + (LL) 208
1D Compatibility (HY) 800 + (ID) 450
Total energy: -35762.0 ( -105.80 by residue)
QMean score : 0.125
(partial model without unconserved sides chains):
PDB file :
Tito_1W6S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W6S-query.scw
PDB file :
Tito_Scwrl_1W6S.pdb
: