Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKKYDETKVKPAISTSQEPKRINGSKFQSVLSKRRYDINFDDKKYAVKTVKTRFLETEQQSSKLRDLLESIPVIGRFLAKIFTSEKETYKKLQLQIDRSSKIRNESRIDDKYTEEISSKLKKSNIEQVDDKKSRSP
3RCO Chain:A ((27-66))
--------------------NGVALPRLQGEYRS-LTGDWIPFKQLGFP--------------TLEAYLRSVPAVVRIETSRSGEITCYAMA---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6673 for 195 contacts (-34.2/contact) +
2D Compatibility (PS) -4165 + (NN) -2150 + (LL) 5656
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -10432.0 ( -53.50 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_3RCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RCO-query.scw
PDB file :
Tito_Scwrl_3RCO.pdb
: