Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLKLPEVTVNWSYPVLNFDLSFRIILISFLSVAFLIVLPAKNFSFSEMLSFFAYTISSLCAILSKQIISVIIFCELMAISASFIIAAGCKDNGPAIRYACVHFFVGIILTAGLAIQNPNLIIMGLLIICACFPFSFWVVDAYPAASLHGASYLSLFTTKISFLIALLHTYNLWQDHAEILAFLGTITAIYGIIFTSLEQNIRRFLAYNVVGQMGILIMTGSLLSHSKNAIPLLILNIIFSIVYQLLLTAVANSIILRTKAVNFNRVGKFMSAEGIYALI--AILTMAAFPGTAGFISKSYIAVEIKMNGTNLELYKNLHKILNLSLYLSVGLKFLY---YIFITKSRSKLLAEKGGGVAMIILASICVIAGNPYLPIYNKPSIFNLAYNTKNIWSQLNLLLCVTLLFIPLRKLFLPRINLKMDIDWIFRALIPYVVSLFNKLIFKMRKISAGALQNLTNSLTNLYFNNANKLKEALSYDSVSFISASSLFLMSILLVLLCLNH |
| 4D7E Chain:A ((1-413)) | ----------------------------------METLLVVGAG------PKALAVAAKSHVLRQLGLSA-PRVIAVEAHAVGGNWLASGGWTDGRHRLGTS-PEKDIGFPYHSTWARGHNREINEAMMAF----SWTSFLVEHGTYAEWIDRGRPSPQ----------------HHVWAKYLQWVARK--IDLELVLGKVRTIRQGWSVEVAGATTELEADGLMITGPGQSTKALAAHPRVLSIAEFWDLAGKRKLPISSRAAVIG--GGETAGSALDELVRHEMLTISVISPMASYFENSLFSDPTKWNALSIQERRDVIRRTDRGVFSVRVQESLLGDNRVHHLQGRVTRIVGQGDGVAVTLRNEM----------RADQVHNFDLVVDATG----GQPLWFLDLFDSESADLLELAVGGPLTQQRIESS-IGYDLAV-------------------TGLGAKLYLPNMAALAQGPGFPNLSCLGELSDRVLR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D7E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -411114 for 3399 contacts (-121.0/contact) +
2D Compatibility (PS) -39551 + (NN) 5528 + (LL) 10384
1D Compatibility (HY) -5600 + (ID) 2850
Total energy: -443203.0 ( -130.39 by residue)
QMean score : 0.192
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