Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIKVQRKKMELGAEVADQFLSEMNQTKIKIQDAKEATETARNVSKSFAQNAKDKNTELHDKVVNFTKKAETASENAEDFAREAFLSKQSTKTLKQETKEL
1QLO Chain:A ((1-34))
---------MSWALEMADTFLDNMRVGPRTYADVRDEINKRGR----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QLO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2966 for 123 contacts (24.1/contact) +
2D Compatibility (PS) -3657 + (NN) -167 + (LL) 5300
1D Compatibility (HY) -2400 + (ID) 400
Total energy: 1642.0 ( 13.35 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_1QLO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QLO-query.scw
PDB file :
Tito_Scwrl_1QLO.pdb
: