Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEKDSNFAMEKPGNNYVGCISSENGECKNFYDLKLNFVKYNSGNNSSLYPYYYNLENFGNFLEVDVKLRELIGLKKGLKD---
1QP2 Chain:A ((1-77))
MVQRGSKVRILRPESY--------------WFQDVGTVASVDQSGIKYPVIVRFEKVNYSGINTNNFAEDELVEVEAPKAKPKK
General information:
TITO was launched using:
RESULT:
Template:
1QP2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1210 for 399 contacts (3.0/contact) +
2D Compatibility (PS) -7244 + (NN) -1761 + (LL) 312
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -10183.0 ( -25.52 by residue)
QMean score : 0.217
(partial model without unconserved sides chains):
PDB file :
Tito_1QP2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QP2-query.scw
PDB file :
Tito_Scwrl_1QP2.pdb
: