Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISGYKNHDLETFDDIFDSVFKIVYFQDKQLHEILDSGEISKVLEILEIPHPSGKSFFLKEYLQKQVCRKKRAITQNSFRHFHTTIFSTTYKHFS
2W84 Chain:A ((47-65))
----------------------------------LTDEEIDMAFQQSGTAADE------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2W84.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2264 for 73 contacts (-31.0/contact) +
2D Compatibility (PS) -1976 + (NN) -1208 + (LL) 5868
1D Compatibility (HY) 400 + (ID) 150
Total energy: 670.0 ( 9.18 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_2W84.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W84-query.scw
PDB file :
Tito_Scwrl_2W84.pdb
: