Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFIILAAGHGKRMNSGLPKVLHKIGNFSMLQHIIYNARQLNPE-NISVVAN-LPLIERLKCLEDIQLITQESTLGTGDAVKTAVRNMKELSDSNIIVVQYGDTPLIKNSTITQMVSCL--EGKALVCLGFKTSNK-EYGRLII-ENGSLREIVETQDDENSDEEFLA-NAGIMVAYAKNLRELVEKIECNGSTYEYYLTDIVSIAVKSNLNVG-YVTTDEEEATGINSRNDLAKAEFYFQENRRKFFTDSGVTLVAPETVFFSLDTQIGMDSIIYPYVFFGPGVRIGPGAKIGPFTKCEDTTIGDGAIV----------------------------------GNFVEAKASDIGTNTKIKHLSYIGNTEVGRESNIGAGTVVCNYDGKKKHRTNIGSNCFVGANSSLIAPLNVHDESVIAAGSIIVKDVPKKRLVITRRKQMVKKIK |
| 1HM9 Chain:A ((15-454)) | --IILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAGQ-TEFVTQSEQLGTGHAVMMTEPILEGLSGHTLVIA--GDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRNDNAEVLRIVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQINKDEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257536 for 3293 contacts (-78.2/contact) +
2D Compatibility (PS) -43201 + (NN) -10712 + (LL) 476
1D Compatibility (HY) -26800 + (ID) 7750
Total energy: -345523.0 ( -104.93 by residue)
QMean score : 0.434
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