Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSKKSEGRIYFAI---EVDIFRY-----------------------IATYY-MLCEQKGSQTEEGVVHNDKYKEQRKKLYGKDEEQKGNRK-
4Q63 Chain:A ((9-101))
YFRLKNHGEINASLDNNSIEIVEISSNGAVVVKQKTDIPKEGVLKLQIHNFIMELCYEVIRAEDNNIVLHFTKEDETNKLFLVLKRLRDERKN
General information:
TITO was launched using:
RESULT:
Template:
4Q63.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14310 for 330 contacts (43.4/contact) +
2D Compatibility (PS) -6938 + (NN) -1206 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 600
Total energy: 766.0 ( 2.32 by residue)
QMean score : 0.120
(partial model without unconserved sides chains):
PDB file :
Tito_4Q63.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q63-query.scw
PDB file :
Tito_Scwrl_4Q63.pdb
: