Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAYNTAPKDLRLIVFLGHLTINNFIILYSIVSIIRNFMSIDKKLKILPNKVLIIVTLVPKDTEKMLQDDKNSKFIMLIY
1P5L Chain:A ((1-19))
-------------------------------------------------------AKKVSKRLEKLFSKIQNDK------
General information:
TITO was launched using:
RESULT:
Template:
1P5L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4707 for 67 contacts (70.3/contact) +
2D Compatibility (PS) -1906 + (NN) 713 + (LL) 5936
1D Compatibility (HY) -400 + (ID) 300
Total energy: 8750.0 ( 130.60 by residue)
QMean score : 0.049
(partial model without unconserved sides chains):
PDB file :
Tito_1P5L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P5L-query.scw
PDB file :
Tito_Scwrl_1P5L.pdb
: