Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKRSIVFDALLILCISFFPIHANESCSNDGQFVENLMLADESTCHKSRKYNGREVISVKDKKLDFYVSANSGKIYSDNSETFVNGIKAIGERVPTLVESRYGTIIKNMVADEIESVKKFDDEIDFQWLNSISLGYYAGENGRIDFETMYSKVNIKNGNSFPIFDRSAGIFAFLLNFYYNPSIQDTQIAPYVGLGIGPTVFRLRKINGSPQNSMPLNVPWFAYQVKLGVSYSIIPEIKTFLGYRYFSIPIPIA----DDISTHNIEIGLIFNF
2J1N Chain:A ((218-346))------------------------------------------------------------------------------------------------------------------------------AETYTGGLKYDAN-NIYLAAQYTQTYNATRVG----SLGWANKAQNFEAVAQYQFD---FGLRPSLA----YLQSKGKNLGRGY--D----DEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF


General information:
TITO was launched using:
RESULT:

Template: 2J1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29467 for 798 contacts (-36.9/contact) +
2D Compatibility (PS) -13567 + (NN) -6350 + (LL) 8948
1D Compatibility (HY) 1200 + (ID) 800
Total energy: -40036.0 ( -50.17 by residue)
QMean score : 0.186

(partial model without unconserved sides chains):
PDB file : Tito_2J1N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J1N-query.scw
PDB file : Tito_Scwrl_2J1N.pdb: