Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIVPKEMRDYTIGSGRSLLDIITEYFQELCEKSGFIKKEYRIERNVDNTFVLDRRVNEPAVTNNRKEIS
1H4V Chain:B ((3-38))
-ARAVRGTKDLFGK-ELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAKEMFTFQDRGGRSL
General information:
TITO was launched using:
RESULT:
Template:
1H4V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4971 for 142 contacts (-35.0/contact) +
2D Compatibility (PS) -3625 + (NN) 449 + (LL) 180
1D Compatibility (HY) 1600 + (ID) 200
Total energy: -6567.0 ( -46.25 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_1H4V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H4V-query.scw
PDB file :
Tito_Scwrl_1H4V.pdb
: