Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPVVHLLPNNDLAQFNYRHVKIDGILSDIELYVFAGQSGYHALSPMLLTTGRYMLVNKGIVREKEEKKAKIAKVVADGVLYCDSSKSKSWLIKNDIALNTWFTLSTEEISNELGIELEKCILWQKGFSGKLAIQPMKHLEYAITWFALSLIWLIMCIAYYRQNKCHLSS
3MJH Chain:A ((40-97))
--------------AAFLTQTVCLDDTTVKFEIWDTAGLERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3MJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8158 for 258 contacts (-31.6/contact) +
2D Compatibility (PS) -6442 + (NN) -2313 + (LL) 2912
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -17251.0 ( -66.86 by residue)
QMean score : -0.041
(partial model without unconserved sides chains):
PDB file :
Tito_3MJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MJH-query.scw
PDB file :
Tito_Scwrl_3MJH.pdb
: