Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSGSQHLFDIIILLSAAVFIVIAFWKMNISPVLGYFVAGALIGSHGFNLIHSAKAMDNFAEFGVVFLLFIIGLELTFERLIAMRIHVFGFGSLQVIVTMVAIWCIALAFGVNTNMAAVIGGGLALSSTAIVLQVLQEKGSQASQVGRLSIAVLLMQDFAVVPLIVLVPLLTGNSENSLISSLTGSLLQAAIALVMIFITGRLLLRPLFSIIARMESNEVFISTTLLIILGAAFITEQFRLSMALGAFVAGLLVAETEHRHSVEHAVLPFKDLLLGLFFMTVGMSINIDLLLNKLPLITLLSIILIVLKTSIIYMLCRFFGFKRAPAIQAGLLLAQGGEFAFILFRLADELNVLPSEIAQVLMMVTTVTMAFTPLLSGLGDWIVNSFSTEKVILDDEAVETDTQDLYNHVIVAGFGRVGYMVTKMLTAEHLSYVVVDIQSKIVKEGKSD-SFPIYLGDATRYEILKSVGIGRAQALVISIKNEVTIKKIVSLVATNFPHV-NIIIRLPDLSNAEVYKDLGASKIIPETSEMGLQLGGAALSLSGISESGVASLKSKFRKGNYSMIKDISSDMDE |
| 2G1U Chain:A ((21-137)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKAD-MVFAFTNDDSTNFFISMNARYMFNVENVIARVYDPEKIKIFEENGIKTICPAVLMIEKVKEFIIGS--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100470 for 925 contacts (-108.6/contact) +
2D Compatibility (PS) -12110 + (NN) -2641 + (LL) 40508
1D Compatibility (HY) -8400 + (ID) 1550
Total energy: -84663.0 ( -91.53 by residue)
QMean score : 0.593
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