Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISVLGSTGSIGKKTVDLLLKRKEEYQVEALSTCSNFALLACQAKLLNARYVAISNKRFYKDLKESLLGTGIKVEVGTEGLMNV-ASLPVDLSVVAVVGIAGLEPVMHVIESGTKVIALANKESIVCGGKLLLKKTEEKNVQIVPIDSEHNAIFQVLQNGNKCVEKIILTASGGSFLNYSLEQLRNVTVGQALSHPTWNMGKKISVDSATMMNKALEIIEAHNLFNISPNRIEAIVHPESIIHGIVIYKDGFNFAVLAEADMAIPISYALSWPERSALSYKLDLTKQKLTFQEPDHKRFPALKLSMEVLNSSSPHTNSIVLNAANEVAVDKFLKSRIDFLEIIKVVKLTVENFDSYTDINSLSDIINIDLESRAIAKEIIKNKVLAYS |
| 3A14 Chain:A ((4-360)) | -RTLVILGATGSIGTQTLDVL-KKVKGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFED-------SSINVWKGSHSIEEMLEALKPDITMVAVSGFSGLRAVLASLEH-SKRVCLANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQVMEPE---VEKVVLTASGGALRDWKISKIDRARPEDVL--------ARITVDSATMVNKAFEVLEAMELFELPFEKIEVKIHREGLVHGAVVLPDGNVKMVVSPPDMRIPISYALFYPRRVALE-PFFLRTISLSFEDPDPEKYPAFFLLKEIKDSYALRT---AFNAADEVAVEAFLKGRIRFGGIHRVIEKTLEEFQGYPQPRTLDDVERIHFEAIKKAERVTEWLS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221439 for 2975 contacts (-74.4/contact) +
2D Compatibility (PS) -36994 + (NN) -8142 + (LL) 1568
1D Compatibility (HY) -30000 + (ID) 7100
Total energy: -302107.0 ( -101.55 by residue)
QMean score : 0.459
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