Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLPDKIIYEGKAKFIIETKDPLTVIQYFKDEVTAFNKEKYKIIEGKGTINNRISTFIMETLEKAGINTHFIKTLSEREQLVKKLKIIPLEIVVRNIAAGSFCKRFNIKEGEKLAFPIIEFFYKNDGLADPMVNENHVLYFGWLSYEEMEEIKTITIKINTVLIDLFLNAGIDLVDLKLEFGRPINDNTKITLADEISPDNCRLWDKNTHKKLDKDVFRLNLGNLKEAYLEVAKRLSVKLC
4O86 Chain:A ((12-232))
-----------AKKMIPIDDDKLIME-FKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEHGIKTHFIGVAGGNRLIVEKLDMYPLEVVVRNVVAGSLKKRLPLPEGYELPEPIVELYYKNDELHDPMINYYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGK--DKNGDIVLADEISPDTCRFWDAKTKRSLDKDVFRFDKGDLIEAYKEIYERITGEKP
General information:
TITO was launched using:
RESULT:
Template:
4O86.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81746 for 1690 contacts (-48.4/contact) +
2D Compatibility (PS) -23834 + (NN) -4715 + (LL) 1040
1D Compatibility (HY) -22800 + (ID) 5100
Total energy: -137155.0 ( -81.16 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_4O86.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O86-query.scw
PDB file :
Tito_Scwrl_4O86.pdb
: