Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRTQYNNLVSSYARALFLVSENKLSVVRKEVEFLLAFFKSQHDVFIYLSHPMISFARKKEVIFSVNEHLSESLVKFIAVIFANKRSNLLISVLEKFLTLVR-ESENELEITIKSAETLSESNIKIITESLSFLGKIVRVDNAVDPSILGGFIVKYGFNLIDASLKSYLDRLVDLSKVEILKTRNFI |
3VG6 Chain:A ((80-122)) | ----------------------------------------------------------------------------------------------EKVKTVVQLEGDNKLVTTFKNIKSVTELNGDIITNTMT-LGDIVFKRISKRIGT--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7869 for 198 contacts (39.7/contact) +
2D Compatibility (PS) -4458 + (NN) 102 + (LL) 11608
1D Compatibility (HY) -3600 + (ID) 900
Total energy: 10621.0 ( 53.64 by residue)
QMean score : 0.031
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