Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTINQLVRKGRLKLSCKKKVPALGKSNPQRRGVCTKVYTTTPRKPNSALRKVARVRISGYGEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGALDLRGVQNRKKARSKYGVKKSS
4B3S Chain:L ((2-118))
-PTINQLVRKGREKVRKKSKVPAL-KGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPK
General information:
TITO was launched using:
RESULT:
Template:
4B3S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24973 for 774 contacts (-32.3/contact) +
2D Compatibility (PS) -12567 + (NN) -4823 + (LL) 36
1D Compatibility (HY) -10000 + (ID) 4550
Total energy: -56877.0 ( -73.48 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_4B3S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B3S-query.scw
PDB file :
Tito_Scwrl_4B3S.pdb
: