Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTPITVAYGDGIGPEIMEAVLSMLREAEAKI-----SIDVIEIGERVYNKEWSYGISPSG-WESIERTKVLLKSPTTTSQGKGHKSLNVALRKSLGLYANIRPCTSY-HPVIENKFDRFDIVVIRENEEDVYTGIE-----------HRLTGNSYQCT---------KIITRSGSEKICRYAFNYAKRHNRKKVTCLTKDNIMKMTDGIF--------------HTAFDS-IAKEYPDIKAEHYIV------DIGMARVATEPENFDVIVTENLYGDILSDIVAQTSGSVGLAGSSNIGSEYAMFEAVHGSAPNIAGKNIANPSG-LLNAAVHMLIYIGQADVAKLVHDAWLKTLEDGIHTADLYKEKKSKQKVGTKEFAEAVIDNIGKKPGILPELIISNGVSSKISKIQGNCEQDYKVRKLVGSDITLAWDKSSNFNQIVKLFESSNPKVIAIYSKGLAIWPGDSKSLSDQVTCRFIANNEKKTITNIDVNNLLIKLERNSFDVVRMDKLYLYDEKEGFFS |
| 1XKD Chain:A ((43-421)) | ---------GDGVGPEVVESALKVVDAAVKKVYGGSRRIVWWELLAGHLAREKCGELLPKATLEGIRLARVALKGPLETPV----RSLNVAIRQALDLYANIRPVRYYGQPAPHKYADRVDMVIFRENTEDVYAGIEWPHDSPEAARIRRFLAEEFGISIREDAGIGVKPISRFATRRLMERALEWALRNGNTVVTIMHKGNIMKYTEGAFMRWAYEVALEKFREHVVTEQEVQEKYGGVRPEGKILVNDRIADNMLQQIITRPWDYQVIVAPNLNGDYISDAASALVGGIGMAAGMNMGDGIAVAEPVHGTAPKYAGKDLINPSAEILSASLLIGEFMGWREVKSIVEYAIRKAVQSKKVTQDLARHMPGVQPLRTSEYTETLIAYIDEADLNEVLAGKRG-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118059 for 2647 contacts (-44.6/contact) +
2D Compatibility (PS) -35391 + (NN) -17935 + (LL) 7740
1D Compatibility (HY) -26000 + (ID) 5900
Total energy: -195545.0 ( -73.87 by residue)
QMean score : 0.374
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