Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQSIIKELQDFWIGEGCTILHPYTSE---------VGAGTLHPATIMSAIDVKPT-KIAYLQPVVRP----AD----GRYGDNPNRLYQHHQYQVIIKPSGN-----NLQDVYLSSLRA---LGISTEK------------------------YDIKF----------IEDDWENPSVGASGLGWEVTC-------------------NGMEVTQLTYIQ--Q--IGS-INCRIIPGEVAYGLERLAMCIQGVNNVYDI-IWNDNGITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK |
| 3HY0 Chain:A ((2-261)) | KSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTA------RHHTFFEMLGNFSFGDYFKLDAILFAWLLLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTAMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86434 for 1274 contacts (-67.8/contact) +
2D Compatibility (PS) -18854 + (NN) -3749 + (LL) -100
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: -114537.0 ( -89.90 by residue)
QMean score : 0.345
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