Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLVVTLPFMIFFNNEVGNYKVQFSYGCVYYATNEYVHAGDKFYSNYFIDSHYGREINMYPQSELLAKGYVGNTLPILISLDKDLIK
3BV6 Chain:C ((236-258))
------------------NYLIETSGGSVY-------HSGDSHYSNYY---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BV6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6018 for 81 contacts (-74.3/contact) +
2D Compatibility (PS) -2646 + (NN) -1555 + (LL) 4700
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -7369.0 ( -90.98 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_3BV6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BV6-query.scw
PDB file :
Tito_Scwrl_3BV6.pdb
: