Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKYKNIGYVASESPKSQEVSKLLQKLNFINITEENKSEVD-----LLVVVGGDGLMLHTLHNYVVGNKDIHVYGVNTGSVGFLMNKYFSSSEDLIDNIEHATSAQLT--LLKMEAIDLSGKK-YHHVAVNEVYVFRKANQIVEMNVAINSKLKMEKFRGDGIILSTPTGSTAYNFSAGGPILPLNSNLFALTSINSYYPRHWNGALISNDTIVQIDINNAQNRPALVVSDYKELHNISQIKMQKDHENTVTLLFDKDYSLDERIFDRQFLY |
| 3V8N Chain:A ((8-186)) | ---------------KGDEKSDLL-RLNMIAGFGEYDMEYDDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAKGEYQKVSYPLLKTTVKYG----EATYLALNESTVKSSGGPFV-VDVVIND-IHFERFRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEMASINNRTIGSPLVFPKHHVVSLQPVNDKDFQISVDHLSILHRDVQEIRYEVSAKKIHFARFRSFPFWRRVHDSFIED |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V8N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72490 for 1094 contacts (-66.3/contact) +
2D Compatibility (PS) -18192 + (NN) -4926 + (LL) 976
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -108632.0 ( -99.30 by residue)
QMean score : 0.251
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