Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIFAFPGQGSQFVGMGRDLYSQFSVAKQVFDEVDSILGRKLSHLIFNGPVEELTITENAQPAITAV-SIATLRVMEHVFGKSLLSDHDVKYVCGHSVGEYTALCAAGALTLESTVKLLKARSEAMHKASLKCKGGMVALLGAEISEVEDILESAQIDEIYGIANDNGGGQVVVSGTAEALEILPGLFKNSSVRKLIKLQVSGPFHSSLMRPADEKILEFLESIDITHPSIPFVSNVTAKEESNPETIKILLAKQIVSRVKWREMVLHMASSGINEFVEIGPNKVLSNLVKRIDQSISTKNIGSISDIDSFFNRSPVLTVENLEVSLS |
3SBM Chain:A ((4-277)) | --YMFPGQGSQAKGMGRALFDAFPA---LTARADGVLGYSIRALCQDDPDQRLSQTQFTQPALYVVNALSYLKRREE--------EAPPDFLAGHSLGEFSALFAAGVFDFETGLALVKKRGELMGDAR---GGGMAAVIGLDEERVRELLDQNGATAV-DIANLNSPSQVVISGAKDEIARLQVPFEAAGAKKYTVLRVSAAFHSRFMRPAMVEFGRFLEGYDFAPPKIPVISNVTAR-PCKADGIRAALSEQIASPVRWCESIRYLMGRGVEEFVECGHGIVLTGLYAQIRRDA------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194824 for 2386 contacts (-81.7/contact) +
2D Compatibility (PS) -29872 + (NN) -16294 + (LL) 3208
1D Compatibility (HY) -19600 + (ID) 5100
Total energy: -262482.0 ( -110.01 by residue)
QMean score : 0.544
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