Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQDNIVPISIVKELEDSYLSYAMSVIISRAIPDVRDGFKPVHRRILYAMSKAGYDAGKPYKKAARIVGDVMGKYHPHGDAAIYDSLVRMAQDFSLLLPLIDGQGNFGSVDGDPPASMRYTEARLQGVSHFLLNDIDENTVDFRPNYDGNESEPVVLPAEFPNLLVNGASGVAVGMATNIPPHNLGEIIDACVLYIDNHEVTLDELLKVVPGPDFPTGGTILGRSGIRSAFATGRGSIVIQGKTHIEDLPQDRQAIVIDEIPYQVNKVKLIEKIGELVKEEKINGITEIRDESDKSGIRVVIDLRKNAAADFILNQILGLTPLRSSFSVNTLVLNNNRPVLMSLKEIIVAFVDFRKEVLIRRTEFRLRKTREKAHIYIGLYIAVLSIDEVIKIVRGTKDPEEANKKLLNKEWKTSAEINTIIGLISDSMSFLKDGVYRLTELQTKAILDIKLQRLTGLERDKLEAELNSMVNLVKEYIAFLGSEEKLMKEIKNNLQEVRNRFAVPRKTVIEESDADIEVEDLIPQEDMVVTVTMNGYIKRVKLSHYRTQRRGGKGKLGQGLKEEDVITKLFVGNTHTSLLFFSNIGRVYRLKVYKLPLAEPTARGRALVNIFPLADGETITNIMPLPSESDESQNIVFATAHGNIRRNSLADFHYIPSNGKIAIKLDEGDKLVSVKVCNETDHVLLSTMLGKSIRFIVSDVRQFKSRNSDGVRGIKLAKNDSVISMTILNGIGVTTETKELYLKVPLAKRLETAVNNSIDSKLEKVLNDLGIDNKLFLKLAANEEFILTITENGFGKRTSAYEYRVTNRGGIGITNILTTNRNGNVVASFPVEQDDNIMLITDKGKLIRISVNGIRIAGRSTQGVTLFKTESREKVVSAAKIEDPGSTEENMPEIGDSASS |
4KOE Chain:A ((3-484)) | ---NIQNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRRILYSMNKDSNTFDKSYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQNWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKKTVPFAWNFDDTEKEPTVLPAAFPNLLVNGSTGISAGYATDIPPHNLAEVIDAAVYMIDHPTAKIDKLMEFLPGPDFPTGAIIQGRDEIKKAYETGKGRVVVRSKTEIEKLKGGKEQIVITEIPYEINKANLVKKIDDVRVNNKVAGIAEVRDESDRDGLRIAIELKKDANTELVLNYLFKYTDLQINYNFNMVAIDNFTPRQVGIVPILSSYIAHRREVILARSRFDKEKAEKRLHIVEGLIRVISILDEVIALIRASENKADAKENL-----KVS---------------------YDFTEEQAEAIVTLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIGDERTMYNLMKKELREVKKKFATPRLSSLED----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -250681 for 3783 contacts (-66.3/contact) +
2D Compatibility (PS) -52038 + (NN) -27019 + (LL) 26056
1D Compatibility (HY) -41600 + (ID) 10200
Total energy: -355482.0 ( -93.97 by residue)
QMean score : 0.544
|
|
|