Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFIQIEETPNPNTLKFLPG--FAILNERE-TADFSNPDEI--KNSKLAADLF-QIEHVIRVFFGHDFISVTKSDGISWDILKVEILTTVMDHFTSGGKALDRKGVNDNNIPDEEFFDENDIEIVNRIKELMENYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLCYHIPEVSGIETTL
2LTL Chain:A ((17-118))
IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVESLMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVISKE---------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LTL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61679 for 668 contacts (-92.3/contact) +
2D Compatibility (PS) -10585 + (NN) -7039 + (LL) 5072
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -82431.0 ( -123.40 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2LTL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LTL-query.scw
PDB file :
Tito_Scwrl_2LTL.pdb
: