Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSFFVFLIFFSVSALASVSDVQLKEKYRDWLVYTALEDGEKVCYIVSYPKKKSEHYTTNRKPYVMVSYVDKKADEVSVTSGFQYDKEPIVLNIDKKIKYALYIIQGDLAWTEHTKTDRDLILKMKQGLSMVVSGRIKATTIDDTYSLLGFQKAYQKMHDLCYVK |
| 2KJ9 Chain:A ((1-118)) | -----------KSVQEKRNNTRAFKTVAKSWFATKTT-------WSEDYQRSVWTRLETYLFPDIGNKDIAEL-------------DTGDLLVPIKKIEK-----LGYLEIAMRVKQYATAIMRYAVQ-----QKMIRFNPAYDLEGAVQKLEHHHHHH------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KJ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 25838 for 793 contacts (32.6/contact) +
2D Compatibility (PS) -11897 + (NN) 1014 + (LL) 4496
1D Compatibility (HY) 2400 + (ID) 800
Total energy: 21051.0 ( 26.55 by residue)
QMean score : -0.150
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