Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLSKYKNQSVAVFGLGKTGLSVINVLIKSG-AKAYAWDDSKEQMANAKTM-YKECNFIHPKKYDWHEIKALILSPGVPISYPKPHWIVKLARSFDCKIKSDIELFLEAKAKNQKIVGVTGTNGKSTTTSLIGHILKSAGKKVAIGGNLGVPILDLEKDAEIYVIEISSFQLELINMPAVIPVHDHTFFSGSQYRAAWMIKRVSEMTKKMTEVTKRMAGMIKVDISVLLNITLDHIDRHGSMENYIAVKSKLIGGSKVAVIGCDNEITADIFNKFTGNKIPISGVRSLLDDKKGAEIQEISLKLENHNLSASDAKINLTSNAENIAASCAVCKLLKVDSSTIIDGIKSFSGLKHRNELLGKIENVLFVNDSKATNAESSKKAILSYKNIYWIVGGRSKEGGIESLSKHFARIRKALLIGESTEVFASTMENKVDYVRCCNLEDAFRLAFEEAIKSKEKTTILLSPACASFDQWRNFEERGEAFCRMFEKLRDSFTITRVV |
| 1HT0 Chain:A ((192-246)) | -------GSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATEC--INPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKINEGFDLLRSGKSIRTVLTF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21983 for 337 contacts (-65.2/contact) +
2D Compatibility (PS) -5551 + (NN) -1409 + (LL) 21796
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -13097.0 ( -38.86 by residue)
QMean score : 0.674
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