Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDENINFETDTTFALIKEAQRRKYKVFAYAPSNLALKLN-QPIALAQKVS-V--DDCNFTSKEDVVINLNEMDIIFIRQDPPFDMRYITTTYILEKTRALVINNPTEMRNCPEKLITSLFP----ELIPPTLITENISMIRDFYHDYR-GIILKPLYSYGGNDVIRIQNENSIQVVVELMITK----------YKCPVIAQAFCKNVNKDKRILLLDGQPIGV-MKRV-PRVSGEIRTNLRLGASFEPVEMN----DRDNEICNKIGPELKKRGL--IFVGIDIVDD-----FLLEINITSPTGVV---YINKLYNTSLEKDLWNTFEEKASSHISQPSL |
| 3VOT Chain:A ((15-321)) | ---------KHLPFIFEEAERLGLKVTFFYNSAEDFPGNLPAVERCVPLPLFEDEEAAMDVVRQ-TFVEFPFDGVMTLFEPAL----PFTAKAAEALNLPG-LPFTTMENCRNKNKTRSILQQNGLNTPVFHEFHTLADLEN--RKLSYPLVVKPVN-----GVVRVDDRKELEEAVRKVEAVNQRDLNRFVHGKTGIVAEQFIDGPEFAIETLSIQGNVHVLSIGYKGNS-KGPF---FEEGVYIAPAQLKEETRLAIVKEVTGAVSAL---GIHQGPAHTELRLDKDGTPYVIEVGARIGGSGVSHYIVKESTGINFMQLVLQNALKPLESSEFEGEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VOT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125488 for 2010 contacts (-62.4/contact) +
2D Compatibility (PS) -27438 + (NN) 1810 + (LL) 1644
1D Compatibility (HY) -2800 + (ID) 1800
Total energy: -154072.0 ( -76.65 by residue)
QMean score : 0.313
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