Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARVKRGVTTHARHKKILNLAKGYRGRAKSCYRIALQRVEKALQYAYRDRRNRKRDFRSLWIIRINAAAREHGLTYGRFMHGLALAGVDLNRKILAEMAVNYKDDFTKLAETVSSKLAENS
4IOC Chain:N ((2-111))
-PRAKTGIVRRRRHKKVLKRAKGFWGSRSKQYRNAFQTLLNAATYEYRDRRNKKRDFRRLWIQRINAGARLHGMNYSTFINGLKRANIDLNRKVLADIAAREPEAFKALVDASRNARQ---
General information:
TITO was launched using:
RESULT:
Template:
4IOC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34277 for 631 contacts (-54.3/contact) +
2D Compatibility (PS) -12019 + (NN) -3386 + (LL) 424
1D Compatibility (HY) -6800 + (ID) 2750
Total energy: -58808.0 ( -93.20 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_4IOC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IOC-query.scw
PDB file :
Tito_Scwrl_4IOC.pdb
: