Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METDIVVIGAGPVGIFTAFQAGMLDMRCHIIDVLDQAGGQCTALYPEKPIYDIPGYPVITAQKLIEQLMEQASPFE-PVYHLSQRVEEIANNDSQSFIVVTSAGTKVKCKAIIIAAGNGIFEPNRPPLSGILEYENKSVFY-NVNKISDFQDKIIVIAGGGDSAADWTVELSKVAKKIYVIHRRKEFRCVSETRNKLKLLESSGRIELVVPYQLHKLTGNDGQLSAVIIKNITSKEEKKISADFLLPFFGLSMDLGPIGSWDIQLERSRVVVDQATLRTSRDRIYAIGD-VAAYLGKLKLILNGFAESTMACYDIYKVIHNSPVNFQYSTSKVVRGKKSDLL |
| 3F8R Chain:A ((17-316)) | ---DVIIVGLGPAAYGAALYSARYMLKTLVIG--ETPGGQLTE---AGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPV--LLDIVEKIENR--E-FVVKTKRKGEFKADSVILGIG---VKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPIYVETVKKKPNVEFVLNSVVKEIKG-DKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLG-FRQVITAVAQGAVAATSAYRYVTEK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266417 for 2557 contacts (-104.2/contact) +
2D Compatibility (PS) -31418 + (NN) -8581 + (LL) 1792
1D Compatibility (HY) -19200 + (ID) 3600
Total energy: -327424.0 ( -128.05 by residue)
QMean score : 0.456
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