Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------MLRLLCEIEYEVRGMENIPKYPFVIASKHQSPLETFIFILLF--------RNAVFILKRELKWIPFIGLHLMALRMIFINRSDGIN------AMRHIIKLARMRIAENRS------IIIFPEGTRTAAKQKT------KYQPGIAALYSVLSV------PVLPVALNTGLFWPKSILSMRRNPGKAVIEI-LPPIYHGLNKNEFLKNLEKTIEERSNKLTAEKN------------------------------------ |
| 1K30 Chain:A ((3-368)) | SHSRKFLDVRSEEELLSCIKKETEAGKLPPNVAAGMEELYQNYRNAVIESGNPKADEIVLSNMTVALDRILLDVEDPFVFSSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQ-----QGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLC-----HDIMPPPSQVEIEIRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGASTADVSLSQPW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79735 for 1225 contacts (-65.1/contact) +
2D Compatibility (PS) -19344 + (NN) -8615 + (LL) 416
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -114328.0 ( -93.33 by residue)
QMean score : 0.242
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