Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNHKNVKKMIKAIAKRTLINKMRKSKTRTAIRKLVDIIKSGNKENVTPAFRSAESNLHKCVSKGVIHKNTAARKISRLNAKVKALMTA
3OTO Chain:T ((21-94))
---------------KRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEA
General information:
TITO was launched using:
RESULT:
Template:
3OTO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11422 for 495 contacts (-23.1/contact) +
2D Compatibility (PS) -7895 + (NN) -2670 + (LL) 1636
1D Compatibility (HY) 0 + (ID) 1500
Total energy: -21851.0 ( -44.14 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_3OTO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OTO-query.scw
PDB file :
Tito_Scwrl_3OTO.pdb
: