Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER |
4GTF Chain:A ((17-221)) | -------------------------ILDKGFVELVDVMGNDLSAVRAARVSFDM--KDEERDRHLIEYLMKHGAETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELSGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDIL------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GTF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159286 for 1504 contacts (-105.9/contact) +
2D Compatibility (PS) -21006 + (NN) -280 + (LL) 5664
1D Compatibility (HY) -19200 + (ID) 4800
Total energy: -198908.0 ( -132.25 by residue)
QMean score : 0.410
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