Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIRIGTRGSSLAIAQALEAKQKLLDLFSSLSVEIIKIKTSGDKYANANLAEIGGKGLFIKEIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILERLSPYDTFISNKYKSLKSLPQQAIIATSSIRRKVQLLNFRPDLNIVPLRGNVTTRLQN---QSFDGIILAEAGLIRLKKDYLITEVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKINNNKSFIRVKSERSFMKTVNGSCFTPLAALAKYVSENVLHLYCMLA--DKKNIYFTERTSFVEDAEKMGMDAGLELKSKCL
1GTK Chain:A ((4-298))NVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMV-----------------GLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELID-GEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGA


General information:
TITO was launched using:
RESULT:

Template: 1GTK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144234 for 2289 contacts (-63.0/contact) +
2D Compatibility (PS) -29943 + (NN) -15576 + (LL) 512
1D Compatibility (HY) -17600 + (ID) 5700
Total energy: -212541.0 ( -92.85 by residue)
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_1GTK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GTK-query.scw
PDB file : Tito_Scwrl_1GTK.pdb: