Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITHMNMLILILLCGIVTLLIRIIPF-IMISKVQLPDV--VVRWLSFIPITLFTALVIDSIIQQTPHGEGYTLNIPYIIALIPTVILSIITRSLTITIISGIVIMATLRFFF
1GCC Chain:A ((1-63))
---------------KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMR-GSRALLNFPLRV---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1GCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55938 for 384 contacts (-145.7/contact) +
2D Compatibility (PS) -6279 + (NN) 77 + (LL) 5764
1D Compatibility (HY) 3200 + (ID) 600
Total energy: -53776.0 ( -140.04 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_1GCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GCC-query.scw
PDB file :
Tito_Scwrl_1GCC.pdb
: