Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------MYKLLISIKEVKIIAIVKNMGVAYVFSKIQPKATI------IATITLVFVALALYLVPGLGLIFALFAT-------IPGIVLW--NKSIQSFGVSALITVIITTVLGNTFVLSAIILVLIASLIIGQLLKERTSKERMLYVTTVAMSLISLIAFMLLQTFG----RI--------------PPSASIVKPFKQTLHE-----AITMSGADANMTQILEEGFRQATVQLPGFIIIITFL-----IVLINLIVTFPVLRKFK---------------IATPVFK--PLFAWQMSGILLW----------IYIIVIICLLFTGQPSVFQSILLNF-QLVLSLVMYIQG-----LSVIHFFGKAKGLPNAVTI------------LLLIIGTILTPTTHIVGLLGVIDLSLNLKRIMKNNSKK--------- |
| 1K2Y Chain:X ((5-463)) | KAPTLPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGAHNPPDYNGFKIVVAGETLANEQIQALRERIEKNDLASG--VGSVEQVDILPRYFKQIRDDIAMAKPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAVDSSLPVPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -417025 for 2516 contacts (-165.7/contact) +
2D Compatibility (PS) -34694 + (NN) -5376 + (LL) 324
1D Compatibility (HY) -7200 + (ID) 2150
Total energy: -466121.0 ( -185.26 by residue)
QMean score : 0.151
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