Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIYMNTIKNTIYTEAIFSKDEKHRYLLKKTWDEKKPACTVITMYPHLDGVL----SLDLTTVLILNQLANSERY--GAVYLVNLFSNIKTP-ENLKHIKEPYDKHTD-IHLMKAIS-ESDTVILAYGAYAKRPVVVERVEQVMEMLKPHKKKVKKLINPATNEIMHPLNPKARQKWTLKA
1UI0 Chain:A ((32-126))
----------------------------------PDAKLMIVGEGPGEEEDKTGRPFVGKAGQLL-NRILEAAGIPREEVYITNIVKCRPPQNRAPL--PDEA-KICTDKWLLKQIELIAPQIIVPLGAVAAE------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42693 for 555 contacts (-76.9/contact) +
2D Compatibility (PS) -9298 + (NN) -3815 + (LL) 7648
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -52458.0 ( -94.52 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_1UI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UI0-query.scw
PDB file :
Tito_Scwrl_1UI0.pdb
: