Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIVLFLIVFILLSLIVSRYLYSVALNVPSKIDVVFNPIEKLIYQLIGTKLEHMSGKTYIKHFL--LFNGLMG-GLSFVLLLIQQWLFLNPNHNLNQSVSLAFNTMASFLTNTNLQH------YAGETDLSYLTQMCVITFLM-FTSAASGYAVCIAMLRRLTGMTD------VIGNFYQDITRFIVRVLIPFALIISLFL---ISQGTPQTLKGNLVIETLSGVKQTIAYGPMASLESIKHLGTNGGGFLGANSSTPFENPTYWSNYAEALSMMLIP--GSLVFLFGRMLKTKLQIHPHAIMIFVAMFVMFIG-FLVTCLYFEFAGNPVL---------HHLGIAGGNMEGKETRFGI--GLSALFTTITTAFTTGTVNNMHDSLTPL----GGMVPMVLMMLNAVFGGEG-VGLMNMLIYVML----------TVFICSLMI----GKTPSYLGMKIEGKEMKLIALSFLVHPLLILVFSALAF-IVPGASDALTNPQFHGVSQVLYEFTSSSANNGSGFEGLGDNTVFWNISTGIVMLLARYIPIVLQILIVSSLVNKKTYQQHTQDVPINNLFFSSVLIIFIILLSGLTFLPDLMLGPIGEQLLLHA-------------- |
| 4XMM Chain:D ((18-715)) | -ILVPMTVNDQPIEKNGDKMPLKFKLGPLSYQNMAFITAKDK-YKLYPVRIPRLDTSKEFSAYVSGLFEIYRDLGDDRVFNVVNSNFAKEHNATVNLAMEAILNELEVFIGRVKDQDGRVNRFYELEESLTVLNCLRTMYFILDGQDVEENRSEFIESLLNWINRSDGEPDEEYIEQVFSVAGKKVFETQYFWKLLNQLVLRGLLSQAIGCIERSDL-LPYLSDTCAVSFDAVSDSIELLKQYPKDSSSTFREWKNLVLKLSQAFGSSATDISGELRDYIEDFLLVIGGNQRKILQYSRTWYESFCGFLLYYIPSLELSAEYLQMSLEANVVDITNDWEQPCVDIISGKIHSILPVMESLDSCTAAFTAMICEAK-GLIENIFEGLEDLFSYRNGMASYMLNSFAFELCSLGDKELWPVAIGLIALSATGTRSAKKMVIAELLPHYPFVTNDDIEWMLSICVEWRLPEIAKEIYTTLGNIESIANFSLVKSYSWLLFEASCMEGQKVLNAIVSKD-DVIIPQDILVTNSMRQTLAPYAVLSQFYDREDWGQALRLLLLLIEFHYLVLLVAKFLYPIFEDSVATVIEVIETKWSNLYETIIEADKSATLLKNLRKKLNFKLCQAFM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -379397 for 3814 contacts (-99.5/contact) +
2D Compatibility (PS) -55362 + (NN) 8290 + (LL) 800
1D Compatibility (HY) -23600 + (ID) 4300
Total energy: -453569.0 ( -118.92 by residue)
QMean score : 0.167
|
|
|