Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIMFVLCGFIFPLTVTALGQV-----LFPEQANGSLVKQDGKVIGSKLIGQQWTEPKYFHGRISAVNYNMNANEVKESGGPASGGSNYGNSNPELKKRVQETIKQEGKKISSDAVTASGSGLDPDITV |
1HPU Chain:A ((422-474)) | --------------LTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTY--RMATLNFN----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -661 for 217 contacts (-3.0/contact) +
2D Compatibility (PS) -4973 + (NN) 772 + (LL) 2792
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -6520.0 ( -30.05 by residue)
QMean score : 0.175
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