Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMCKLEWDDEINFGKISFLSHSHIPDRKTGLELAEKYGIDGVMIGSGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRALANFDIN
4FCX Chain:B ((29-107))
-------------GNDSFVSFNEI------LEIARERDVDMILLGGDIFH-----DNKPSRKALYQALRSLRLN--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4FCX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12028 for 250 contacts (-48.1/contact) +
2D Compatibility (PS) -5709 + (NN) -5423 + (LL) 4504
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -23556.0 ( -94.22 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_4FCX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FCX-query.scw
PDB file :
Tito_Scwrl_4FCX.pdb
: