Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MNDMLISLVIPVFAL-LVIGGIIWVIIEGIVHISKKNKAIDNFLNQVNKV-S----------ETYK--FATAFLFLI--------------------LATAGISQFYLYYIVSAF---------LFWLVILTFGIAG----IIFLMPYGLCFL--PLYKQKKKKQTFKKYM-VYT--TIGLSICLGLSLVLVHTTKIYMDE-GGV--------RYYYGSF---VMKQA---GGYAYLA-LAV-----------LSTLLIVAKKATNKNKEIETVDNTNITER----- |
| 3GN6 Chain:A ((22-321)) | FNPWTDAALDTIVNQALTLYAEMRVVPAHHDAFLAAIDTVSAKLRVLPGFLSLALKQMSGDSTMVKNYPETYKGVLATAYLDGVAAGTQPYFYNLFVRFADGRAARAAGFEALFETHIHPLLHAMADGPELLAYRAVLQSVVAGDRHAIYRGAEEIRSFLRRPVELPERETVTVENHVMVPEDKHAAWEPQVAILLQVAQDTFEPQDEPSGVGLPGARDNRYYRKALSTEILRNAHADGGLRAYIMHGVWESVWDHENSHLDPRFLAAAGPVGAAAVVGPVEPFYLTRRLVVAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118543 for 1278 contacts (-92.8/contact) +
2D Compatibility (PS) -21066 + (NN) 1057 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 2450
Total energy: -145402.0 ( -113.77 by residue)
QMean score : 0.037
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