Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLALVISNIFIHILEPKLSITTQIIIVLILIEALIGLRFLKAYDVKRGKDKENKKNSKDFVKLKSILVAILFTSLALTAGTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKK
2L9U Chain:A ((637-676))
-----------------------------------------------------MGRTHLTMALTVIAGLVVIFMMLGGTFLYWRGRRHHHHHH-------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2L9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8531 for 154 contacts (-55.4/contact) +
2D Compatibility (PS) -4316 + (NN) -2884 + (LL) 9508
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -9373.0 ( -60.86 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_2L9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L9U-query.scw
PDB file :
Tito_Scwrl_2L9U.pdb
: