Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLNKLVLGISFLFLVISITAGCG----MGKEAEIKKSFEKTMSMYPIKNLEDLYDKEGYRDDQ-------FDKNDKGTWIVNSQMAIQNKGEPMKSKGMVLYMNRNTRTTNGYYYVNVIKGEDKGKHQDNEKRYPVKMVDNKIILTKEIKDENIKIEIENFKFFVQYGNFKDLENYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKEENIYFSDGLIFKPSEDK |
3TD7 Chain:A ((35-295)) | HNGLITKIWGTAGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNNKLEVDYGLSYEDVVNKYESFRAKCGKVTPLDHKAFSFKKLYYMDAPIVSLDKVENFVRIARMRGISDKYFAFLELATVLNGDFNELKKQSSWEYRNKYAQKKIRHMRENAIPSIEEQGYWKGTPTIDELKLLLFLASNL--NRTEVNDAINNVERLESTHYIEN----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 50367 for 1663 contacts (30.3/contact) +
2D Compatibility (PS) -24882 + (NN) -214 + (LL) 144
1D Compatibility (HY) -800 + (ID) 1700
Total energy: 22915.0 ( 13.78 by residue)
QMean score : 0.152
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