Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MICSQTLFRYPTHMIFLMKHNYMIDCIILLNNLLQTCHFTLKIYII---SDDILQVIYK-----
1HA8 Chain:A ((1-51))
GECEQCFSDGG-------------DCTTCFNNGTGPCANCLAGYPAGCSNSDCTAFLSQCYGGC
General information:
TITO was launched using:
RESULT:
Template:
1HA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32009 for 277 contacts (-115.6/contact) +
2D Compatibility (PS) -4077 + (NN) 2464 + (LL) 1556
1D Compatibility (HY) 1200 + (ID) 500
Total energy: -31366.0 ( -113.23 by residue)
QMean score : 0.146
(partial model without unconserved sides chains):
PDB file :
Tito_1HA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HA8-query.scw
PDB file :
Tito_Scwrl_1HA8.pdb
: