Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKLRDTTFLSYLFTIILWGSAFPMIKIALNDFSAESLSAFRLILATIILLPFVIIKKLPTPELRDIPVIFILGFCGFVIYHTALNFGETLISAGISGIL-VSTTPIFSSALAYIFLKEHFSKWNWLSSLVAFIGISIISISKDDYTTINVLGVFIILLASFSESLYFTFQKKYIEKYGFIAFTLYTIMASSPFMLIFIPEIINDIHGATFTSIV----SVLYLAIFPTIIPYVLLAYIVKSVGVSDATMSLYLTPIVSLLLSYLLLDELPTTLAIIGGIITLLGVSLSNFFQNT-- |
1FOU Chain:A ((11-285)) | ------------------------SINEIQRQKRNRWFIHYLNYLQSLAYQLFEWENLPPTINPSFLEKSIHQF--GYVGFYKDPVISYIACNGALSGQRDVYNQATVFRAASPVYQKE-FKLYNYRDMKEEDMGVVIYN-NDMAFPTTPTLELFAAELAELKEIISVNQNAQKTPV----------LIRANDNNQLSLKQVYNQYEGNAPVIFAHEALDSDSIEVFKTDAPYVVDKLNAQKNAVWNEMMTFKLQT--DEQIDSSGTVFLKSREEACEKINELYGLNVKVKFRYDIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161112 for 1711 contacts (-94.2/contact) +
2D Compatibility (PS) -25806 + (NN) -2007 + (LL) 3640
1D Compatibility (HY) -400 + (ID) 1900
Total energy: -187585.0 ( -109.63 by residue)
QMean score : 0.139
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