Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MMIGSSFIPLQRVLMYFINPNDSMDQFTLEVLRLPRITLAILA-GAALGMSGLMLQNVLKNPIASPDIIGITGGASLSAVVFI--------AFFSHLTIHLLPLFAVLGGAVAMMI---------LLVFQTKGQIRPTILIIIGISM---QTLFIALVQGLLITT-KQLSAAKAYTWLVGSLYGATFKDTIIL---GMVILAVVP---LLFLVI-PKMKISILD----------DPVAIGLGLHVQRMKLIQLITSTILVSMAISLVGNIGFVG-LIAPHIAKT--------IVRGSYAKKLLMSA-MIGAISIV--IADLIGRTLFL---PKEVPAG-----VFIAAFGAPF-------------FIYLLLTVKKL----------------------------------------- |
| 3BWS Chain:A ((27-433)) | GTEIVKFSIHPYKGTVIRLGEEILPFKVLEMD------KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291770 for 1988 contacts (-146.8/contact) +
2D Compatibility (PS) -31535 + (NN) 5708 + (LL) 1428
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -328969.0 ( -165.48 by residue)
QMean score : 0.072
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