Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MLLKPKYQI----VIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNP--IASPGLFGVNAGAVF----FVIFSIT---FIQIQSFKMIVVIAFLGAI----------VVTILVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGIL---------IMNETDLQGLLFWLS--GSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDDIATGLG-QNIKLIKWMIIMLISMLAGISVAVAGSIV----------FVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIYIMKKGRQRL |
| 1KIJ Chain:A ((7-390)) | AIRVLKGLEGVRHRPAMYIGGTG-VEGYHHLFKEILDNAVDEALAGYATEILVRLNEDGSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGKFEQGAYKVSGGLHGVGASVVNALSEWTVVEVFREGKHHRIAFSRGEVTEPLRVVGEAPRGKTGTRVTFKPDPEIFGN-LRFDPSKIRARLREVAYLVAGLKLVFQDRQHGKEEVFLDKGGVASFAKALAEGEDLLYEKPFLIRGTHGEVEVEVGFLHTQGYNAEILTYANMIPTRDGGTHLTAFKSAYSRALNQYAKKAGLNKEKGPQPTGDDLLEGLYAVVSVKLPNPQFEGQTKGKLLNPEAGTAVGQVVYERLLEILEENPRIAKAVYEKALRAAQAREAARKARELV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -400166 for 2574 contacts (-155.5/contact) +
2D Compatibility (PS) -35355 + (NN) -8437 + (LL) 312
1D Compatibility (HY) 5600 + (ID) 2300
Total energy: -440346.0 ( -171.07 by residue)
QMean score : 0.142
|
|
|