Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNREMLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPLKPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIKRVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPYIEYDWLQKGAFISNISI-----MDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLNLY |
| 1OMO Chain:A ((1-320)) | --METLILTQEEVESLI--SMDEAMNAVEEAFRLYALGKAQMPPKVYLEFE------KGDLRAMPAHLM---GYAGLKWVNSHPGNPD-KGLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGCGTQAYFQLEALRRVF-DIGEVKAYDVREKAAKKFVSYCEDR--G--ISASVQPAEEASRCDVLVTTTPSRKPVVKAEWVEEGTHINAIGADGPGKQELDVEILKKA-KIVVDDLEQAKHG-GEINVAVSKGVIGVEDVHATIGEVIAGLKDGRESDEEITIFDSTGLAIQDVAVAKVVYENALSKNVGSKIKFF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204981 for 2830 contacts (-72.4/contact) +
2D Compatibility (PS) -33926 + (NN) -15254 + (LL) -128
1D Compatibility (HY) -18000 + (ID) 5100
Total energy: -277389.0 ( -98.02 by residue)
QMean score : 0.526
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