Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MKKLQLKKWKCRENDIEAVHNNK-------GYAYQRKLDALEEVRKGYYPIKRA-----IDLVLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKL--------RSMCKNAEKNGAQWADKDDDRITNVGKFIRKTR------IDELPQLINVVKGEMSFI--GPRPERPEFVELFSSEVIGFEQRCLVTPGLTGLAQ------IQGGYDLTPQQKLKYDMKYIHK-----GSLMMELYISIRTLMVVITGEGSR----- |
| 5CPC Chain:A ((30-317)) | KAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51845 for 1487 contacts (-34.9/contact) +
2D Compatibility (PS) -22967 + (NN) 999 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -82213.0 ( -55.29 by residue)
QMean score : 0.118
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