Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENQHNSKLLTLLLIGLAVFIQQSSVIAGVNVSIADFITLLILVYLLFFANHL-LKANHFLQFFIILYTYRMIITLCLLFFDDLIFITVKEVLASTVKYAFVVIYFYLGMIIFKLGNSKKVIVTSYIISSVTIGLFCIIAGLNKSPLLMKLLYFDEIRSKGLMNDPNYFAMTQIITLVLAYKYIHNYIFKVLACGILLWSLTTTGSKTAFIILIVLAIYFFIKKLFSRNAVSVVSMLVIMLILLCFTFYNINYYLFQLSDLDAVPSLDRMASIFEEGFASLNDSGSERSVVWINAILVIKYTLGFGVGLVDYVHIGSQINGILLVAHNTYLQIFAEW-----GILF-GALFIIFMLYLLFELFRFNISGKNVTAIVVMLTMLIYFL--------------TVSFNNSRYVAFILGIIVFIVQYEKMERDRNEE |
| 4V1S Chain:A ((37-395)) | PGVEIGNNDYYTWCKETLSVIDKDLKISGTHS---------------YYENQDRSQVSFIWGNIFLLYTYTEGISLS------------KSEWSDALMNCFLNFDNY--------------WHPNY---KGIAGYATLPTSAEKVP--------------DRFYDENGWTA---IGLCDAYLATQNNSYLEKAKGALAFSLS--GEDNVLGGGIYFQETFVSLPVQKNTICSAVTMLSCMKLYEITQDRQYLDAAIRINDWTVENLLDKSDNLLWD--AKMVADGSVNTQKW-------SYNAGFMIRSWLKMYQATKDEKYLSQAKATLASSEAKWYNSINGALNDPGYFAFSIIDSWFDMYDTDKNTVWLTKAFHAINFIHNKLRDGNGRYPEHWGTPTTSNLEKYDLRFSTVAAYMYMRAANYKRILN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -479405 for 2973 contacts (-161.3/contact) +
2D Compatibility (PS) -34776 + (NN) -4925 + (LL) 8096
1D Compatibility (HY) -800 + (ID) 3150
Total energy: -514960.0 ( -173.21 by residue)
QMean score : 0.184
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